Bibliography
Sean McMahon
Needham, Jessica, Merow, Cory, Chang-Yang, Chia, Caswell, Hal, and McMahon, Sean M. 2018. "Inferring forest fate from demographic data: from vital rates to population dynamic models." Proceedings of the Royal Society B: Biological Sciences, 285, (1874). https://doi.org/10.1098/rspb.2017.2050.
Sedio, Brian E., Parker, John D., McMahon, Sean M., and Wright, S. Joseph. 2018. "Comparative metabolomics of forest communities: Species differences in foliar chemistry are greater in the tropics." bioRxiv, 271361. https://doi.org/10.1101/271361.
Sedio, Brian E., Parker, John D., McMahon, Sean M., and Wright, S. Joseph. 2018. "Comparative foliar metabolomics of a tropical and a temperate forest community." Ecology, 99, (12) 2647–2653. https://doi.org/10.1002/ecy.2533.
Taylor, Tyeen C., McMahon, Sean M., Smith, Marielle N., Boyle, Brad, Violle, Cyrille, van Haren, Joost, Simova, Irena, Meir, Patrick, Ferreira, Leandro V., de Camargo, Plinio B., da Costa, Antonio C. L., Enquist, Brian J., and Saleska, Scott R. 2018. "Isoprene emission structures tropical tree biogeography and community assembly responses to climate." New Phytologist, 220, (2) 435–446. https://doi.org/10.1111/nph.15304.
Herrmann, Valentine, McMahon, Sean M., Detto, Matteo, Lutz, James A., Davies, Stuart J., Chang-Yang, Chia-Hao, and Anderson-Teixeira, Kristina J. 2017. [Dataset] Data from: Tree circumference dynamics in four forests characterized using automated dendrometer bands. Distributed by Dryad. https://doi.org/10.5061/DRYAD.B327C.
LaManna, Joseph A., Mangan, Scott A., Alonso, Alfonso, Bourg, Norman A., Brockelman, Warren Y., Bunyavejchewin, Sarayudh, Chang, Li-Wan, Chiang, Jyh-Min, Chuyong, George B., Clay, Keith, Condit, Richard S., Cordell, Susan, Davies, Stuart J., Furniss, Tucker J., Giardina, Christian P., Gunatilleke, I. A. U. Nimal, Gunatilleke, C. V. Savitri, He, Fangliang, Howe, Robert W., Hubbell, Stephen P., Hsieh, Chang-Fu, Inman-Narahari, Faith M., Janik, David, Johnson, Daniel J., Kenfack, David et al. 2017. "Plant diversity increases with the strength of negative density dependence at the global scale." Science, 356, (6345) 1389–1392. https://doi.org/10.1126/science.aam5678.
McMahon, Sean M. 2017. "Temperature Forests: A Tale of the Anthropocene." In Living in the anthropocene : Earth in the age of humans. Kress, W. John and Stine, Jeffrey K., editors. 53–57. Washington, DC: Smithsonian Books.
Anderson-Teixeira, Kristina J., McGarvey, Jennifer C., Muller-Landau, Helene C., Park, Janice Y., González-Akre, Erika B., Herrmann, Valentine, Bennett, Amy C., So, Christopher V., Bourg, Norman A., Thompson, Jonathan R., McMahon, Sean M., and McShea, William J. 2016. [Dataset] Data from: Size-related scaling of tree form and function in a mixed-age forest. Distributed by Dryad Digital Repository. https://doi.org/10.5061/DRYAD.6NC8C.
Evans, Margaret, Merow, Cory, Record, Sydne, McMahon, Sean M., and Enquist, Brian J. 2016. "Towards Process-based Range Modeling of Many Species." Trends in Ecology & Evolution, 31, (11) 860–871. https://doi.org/10.1016/j.tree.2016.08.005.
Griffith, Alden B., Salguero-Gómez, Roberto, Merow, Cory, and McMahon, Sean. 2016. "Demography beyond the population." Journal of Ecology, 104, (2) 271–280. https://doi.org/10.1111/1365-2745.12547.
Herrmann, Valentine, McMahon, Sean M., Detto, Matteo, Lutz, James A., Davies, Stuart J., Chang-Yang, Chia-Hao, and Anderson-Teixeira, Kristina J. 2016. [Dataset] Tree circumference dynamics over short time scales using automated dendrometer bands in four forests. Distributed by Panama: Smithsonian Tropical Research Institute. https://doi.org/10.5479/data_serc/10088/30918.
Herrmann, Valentine, McMahon, Sean M., Detto, Matteo, Lutz, James A., Davies, Stuart James, Chang-Yang, Chia, and Anderson-Teixeira, Kristina J. 2016. "Tree Circumference Dynamics in Four Forests Characterized Using Automated Dendrometer Bands." Plos One, 11, (12) 1–20. https://doi.org/10.1371/journal.pone.0169020.
Janík, David, Král, Kamil, Adam, Dusan, Hort, Libor, Samonil, Pavel, Unar, Pavel, Vrska, Tomás, and McMahon, Sean. 2016. "Tree spatial patterns of Fagus sylvatica expansion over 37 years." Forest Ecology and Management, 375 134–145. https://doi.org/10.1016/j.foreco.2016.05.017.
Král, Kamil, Shue, Jessica, Vrška, Tomáš, González-Akre, Erika B., Parker, Geoffrey G., McShea, William J., and McMahon, Sean M. 2016. "Fine-scale patch mosaic of developmental stages in Northeast American secondary temperate forests: the European perspective." European Journal of Forest Research, 135, (5) 981–996. https://doi.org/10.1007/s10342-016-0988-1.
Needham, Jessica, Merow, Cory, Butt, Nathalie, Malhi, Yadvinder, Marthews, Toby R., Morecroft, Michael, and McMahon, Sean M. 2016. "Forest community response to invasive pathogens: the case of ash dieback in a British woodland." Journal of Ecology, 104, (2) 315–330. https://doi.org/10.1111/1365-2745.12545.
Anderson-Teixeira, Kristina J., Davies, Stuart James, Bennett, Amy C., González-Akre, Erika B., Muller-Landau, Helene C., Wright, S. Joseph, Abu Salim, Kamariah, Almeyda Zambrano, Angélica M., Alonso, Alfonso, Baltzer, Jennifer L., Basset, Yves, Bourg, Norman A., Broadbent, Eben N., Brockelman, Warren Y., Bunyavejchewin, Sarayudh, Burslem, David F. R. P., Butt, Nathalie, Cao, Min, Cardenas, Dairon, Chuyong, George B., Clay, Keith, Cordell, Susan, Dattaraja, Handanakere S., Deng, Xiaobao, Detto, Matteo et al. 2015. "CTFS-ForestGEO: a worldwide network monitoring forests in an era of global change." Global Change Biology, 21, (2) 528–549. https://doi.org/10.1111/gcb.12712.
Anderson-Teixeira, Kristina J., McGarvey, Jennifer C., Muller-Landau, Helene C., Park, Janice Y., González-Akre, Erika B., Herrmann, Valentine, Bennett, Amy C., So, Christopher V., Bourg, Norman A., Thompson, Jonathan R., McMahon, Sean M., and McShea, William J. 2015. "Size-related scaling of tree form and function in a mixed-age forest." Functional Ecology, 29, (12) 1587–1602. https://doi.org/10.1111/1365-2435.12470.
McMahon, Sean M., Bebber, Daniel P., Butt, Nathalie, Crockatt, Martha, Kirby, Keith, Parker, Geoffrey G., Riutta, Terhi, and Slade, Eleanor M. 2015. "Ground based LiDAR demonstrates the legacy of management history to canopy structure and composition across a fragmented temperate woodland." Forest Ecology and Management, 335 255–260. https://doi.org/10.1016/j.foreco.2014.08.039.
McMahon, Sean M. and Parker, Geoffrey G. 2015. "A general model of intra-annual tree growth using dendrometer bands." Ecology and Evolution, 5, (2) 243–254. https://doi.org/10.1002/ece3.1117.
Metcalf, C. Jessica E., Ellner, Stephen P., Childs, Dylan Z., Salguero-Gómez, Roberto, Merow, Cory, McMahon, Sean M., Jongejans, Eelke, and Rees, Mark. 2015. "Statistical modelling of annual variation for inference on stochastic population dynamics using Integral Projection Models." Methods in Ecology and Evolution, 6, (9) 1007–1017. https://doi.org/10.1111/2041-210X.12405.
Sexton, Joseph O., Noojipady, Praveen, Anand, Anupam, Song, Xiao-Peng, McMahon, Sean M., Huang, Chengquan, Feng, Min, Channan, Saurabh, and Townshend, John R. 2015. "A model for the propagation of uncertainty from continuous estimates of tree cover to categorical forest cover and change." Remote Sensing of Environment, 156 418–425. https://doi.org/10.1016/j.rse.2014.08.038.
Visser, Marco D., McMahon, Sean M., Merow, Cory, Dixon, Philip M., Record, Sydne, and Jongejans, Eelke. 2015. "Speeding Up Ecological and Evolutionary Computations in R; Essentials of High Performance Computing for Biologists." PLoS computational biology, 11, (3) 1–11. https://doi.org/10.1371/journal.pcbi.1004140.
Kral, Kamil, McMahon, Sean M., Janik, David, Adam, Dusan, and Vrska, Tomas. 2014. "Patch mosaic of developmental stages in central European natural forests along vegetation gradient." Forest Ecology and Management, 330 17–28. https://doi.org/10.1016/j.foreco.2014.06.034.
Merow, Cory, Dahlgren, Johan P., Metcalf, C. J., Childs, Dylan Z., Evans, Margaret E. K., Jongejans, Eelke, Record, Sydne, Rees, Mark, Salguero-Gómez, Roberto, and McMahon, Sean M. 2014. "Advancing population ecology with integral projection models: a practical guide." Methods in Ecology and Evolution, 5, (2) 99–110. https://doi.org/10.1111/2041-210X.12146.
Merow, Cory, Latimer, Andrew M., Wilson, Adam M., McMahon, Sean M., Rebelo, Anthony G., and Silander, John A., Jr. 2014. "On using integral projection models to generate demographically driven predictions of species' distributions: development and validation using sparse data." Ecography, 37, (12) 1167–1183. https://doi.org/10.1111/ecog.00839.
Merow, Cory, Smith, Mathew J., Edwards, Thomas C., Guisan, Antoine, McMahon, Sean M., Normand, Signe, Thuiller, Wilfried, Wüest, Rafael O., Zimmermann, Niklaus E., and Elith, Jane. 2014. "What do we gain from simplicity versus complexity in species distribution models?" Ecography, 37, (12) 1267–1281. https://doi.org/10.1111/ecog.00845.
Réjou-Méchain, M., Muller-Landau, Helene C., Detto, Matteo, Thomas, S. C., Le Toan, T., Saatchi, S. S., Barreto-Silva, J., Bourg, N. A., Bunyavejchewin, S., Butt, N., Brockelman, W. Y., Cao, M., Cárdenas, D., Chiang, J. M., Chuyong, G. B., Clay, Keith, Condit, Richard S., Dattaraja, H. S., Davies, Stuart James, Duque, A., Esufali, S., Ewango, C., Fernando, R. H. S., Fletcher, C. D., Gunatilleke, I. A. U. N. et al. 2014. "Local spatial structure of forest biomass and its consequences for remote sensing of carbon stocks." Biogeosciences Discussions, 11, (4) 5711–5742. https://doi.org/10.5194/bgd-11-5711-2014.
Chisholm, Ryan A., Muller-Landau, Helene C., Abdul Rahman, Kassim, Bebber, Daniel P., Bin, Yue, Bohlman, Stephanie A., Bourg, Norman A., Brinks, Joshua, Bunyavejchewin, Sarayudh, Butt, Nathalie, Cao, Honglin, Cao, Min, Cárdenas, Dairon, Chang, Li-Wan, Chiang, Jyh-Min, Chuyong, George, Condit, Richard S., Dattaraja, Handanakere S., Davies, Stuart, Duque, Alvaro, Fletcher, Christine, Gunatilleke, Nimal, Gunatilleke, Savitri, Hao, Zhanqing, Harrison, Rhett D. et al. 2013. "Scale-dependent relationships between tree species richness and ecosystem function in forests." Journal of Ecology, 101, (5) 1214–1224. https://doi.org/10.1111/1365-2745.12132.
Metcalf, C. Jessica E., McMahon, Sean M., Salguero-Gómez, Roberto, and Jongejans, Eelke. 2013. "IPMpack: an R package for integral projection models." Methods in Ecology and Evolution, 4, (2) 195–200. https://doi.org/10.1111/2041-210x.12001.
Stark, Scott C., Leitold, Veronika, Wu, Jin L., Hunter, Maria O., de Castilho, Carolina V., Costa, Flávia R. C., McMahon, Sean M., Parker, Geoffrey G., Shimabukuro, Mô, Lefsky, Michael A., Keller, Michael, Alves, Luciana F., Schietti, Juliana, Shimabukuro, Yosio Edemir, Brandão, Diego O., Woodcock, Tara K., Higuchi, Niro, de Camargo, Plinio B., de Oliveira, Raimundo C., and Saleska, Scott R. 2012. "Amazon forest carbon dynamics predicted by profiles of canopy leaf area and light environment." Ecology Letters, 15, (12) 1406–1414. https://doi.org/10.1111/j.1461-0248.2012.01864.x.
Makana, Jean-Remy, Ewango, Corneille N., McMahon, Sean M., Thomas, Sean C., Hart, Terese B., and Condit, Richard S. 2011. "Demography and biomass change in monodominant and mixed old-growth forest of the Congo." Journal of Tropical Ecology, 27 447–461. https://doi.org/10.1017/S0266467411000265.
McMahon, Sean M., Harrison, Sandy P., Armbruster, W. Scott, Bartlein, Patrick J., Beale, Colin M., Edwards, Mary E., Kattge, Jens, Midgley, Guy, Morin, Xavier, and Prentice, I. Colin. 2011. "Improving assessment and modelling of climate change impacts on global terrestrial biodiversity." Trends in Ecology & Evolution, 26, (5) 249–259. https://doi.org/10.1016/j.tree.2011.02.012.
McMahon, Sean M., Metcalf, Charlotte J. E., and Woodall, Christopher W. 2011. "High-Dimensional Coexistence of Temperate Tree Species: Functional Traits, Demographic Rates, Life-History Stages, and Their Physical Context." PLoS ONE, 6, (1) e16253.
Salk, Carl F. and McMahon, Sean M. 2011. "Ecological and environmental factors constrain sprouting ability in tropical trees." Oecologia, 166, (2) 485–492. https://doi.org/10.1007/s00442-010-1850-7.
Canning-Clode, João, Maloney, Kelly O., McMahon, Sean M., and Wahl, Martin. 2010. "Expanded view of the local-regional richness relationship by incorporating functional richness and time: a large-scale perspective." Global Ecology and Biogeography, 19, (6) 875–885. https://doi.org/10.1111/j.1466-8238.2010.00560.x.
Clark, James S., Bell, David, Chu, Chengjin, Courbaud, Benoit, Dietze, Michael, Hersh, Michelle, HilleRisLambers, Janneke, Ibáñez, Inés, LaDeau, Shannon, McMahon, Sean M., Metcalf, Jessica, Mohan, Jacqueline, Moran, Emily, Pangle, Luke, Pearson, Scott, Salk, Carl, Shen, Zehao, Valle, Denis, and Wyckoff, Peter. 2010. "High-dimensional coexistence based on individual variation: a synthesis of evidence." Ecological Monographs, 80, (4) 569–608. https://doi.org/10.1890/09-1541.1.
McMahon, Sean M., Parker, Geoffrey G., and Miller, Dawn R. 2010. "Evidence for a recent increase in forest growth." Proceedings of the National Academy of Sciences of the United States of America, 107, (8) 3611–3615. https://doi.org/10.1073/pnas.0912376107.
McMahon, Sean M., Parker, Geoffrey G., and Miller, Dawn R. 2010. "Reply to Foster et al.: Using a forest to measure trees: Determining which vital rates are responding to climate change." Proceedings of the National Academy of Sciences of the United States of America, 107, (21) E88–E89; E88-E89.
McMahon, Sean M., Dietze, Michael C., Hersh, Michelle H., Moran, Emily V., and Clark, James S. 2009. "A Predictive Framework to Understand Forest Responses to Global Change." Annals of the New York Academy of Sciences, 1162, (1) 221–236. https://doi.org/10.1111/j.1749-6632.2009.04495.x.
Metcalf, C. Jessica E., McMahon, Sean M., and Clark, James S. 2009. "Overcoming data sparseness and parametric constraints in modeling of tree mortality: a new nonparametric Bayesian model." Canadian Journal of Forest Research-Revue Canadienne De Recherche Forestiere, 39, (9) 1677–1687. https://doi.org/10.1139/X09-083.
McMahon, Sean M. and Metcalf, C. J. E. 2008. "Transient sensitivities of non-indigenous shrub species indicate complicated invasion dynamics." Biological Invasions, 10, (6) 833–846. https://doi.org/10.1007/s10530-008-9242-1.
